Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRTEVNKRLEAMKEEERQKYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYREEGLDLHDCACEGPFHDHEKKGQKGKKPSHHKH
2XRH Chain:A ((1-100))
-------------AIDPFTMAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGNME----------------------DMDDDFGLRS--------
General information:
TITO was launched using:
RESULT:
Template:
2XRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 40901 for 628 contacts (65.1/contact) +
2D Compatibility (PS) -10882 + (NN) -7046 + (LL) 2620
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 21993.0 ( 35.02 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_2XRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XRH-query.scw
PDB file :
Tito_Scwrl_2XRH.pdb
: