Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSARPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLWGSKRIGPDLHRVGDY-----------RTTDWHEKHMLDPKSVVP---HSIMPAY-KHLFIKKSDFDTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
1W2L Chain:A ((4-98)) | ----------------------------------------------PLAELGARLYREKACFSCHSIDG----------------------------SRLVGPSFKGLYGSTRTFEDGTTAVADENYLRESILQPGAKVVQGYPNVMPASYASLSER--EVAALIEFIKQQQ--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9130 for 520 contacts (-17.6/contact) +
2D Compatibility (PS) -8313 + (NN) -2311 + (LL) 10852
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -13002.0 ( -25.00 by residue)
QMean score : 0.280
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