Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITIPIVIAFDNHYAIPAGVSLYSMLACAKSENPKSQNPQLQSDNKKLFYKIHCLVDNLSLENQQKLKETLVPFSAFASVDFLDISTPNLYTTSVEPSVIDKIHEAFL-QLNIYAKTRFSKMVM-C---RLFLASLFPQYD-KIIMFDADTLFLN-DVSESFFIPLDSYYFGAAKDFSSPKSLKHFQTEREREPRQKFSLYEHYLKEKDMQIICENHY-NVGFLIVNLKLWRADKLEEHLLNLTHQKGQCVFCPEQDLLTLACYQKVLQLPYIYNAHPFMANQKRFIPNQQEIIMLHFYFVGKPWILPTALYSKEWHEILLKTPFYAEYSVKFLKQMTECLSLQDKQKTFEFLAPLLNPKTLLEYVFFRLS-KIFKRLKERFLNS |
| 3LOU Chain:A ((8-292)) | -PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDD---DLSARFFVRCVFHATDLR---VDALRREFEPIAERF-----------------------------RMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGE---------LKMDIVG--IVSNHPDFAPLAAQHGLP--FRHFPITADTKAQQEAQWLDV-FETSGAELVILARYMQV------LSPEASARLANRAINIHHS----------------------FLPGFKGAKPYHQAHAR----GVKLIGATAHFVTDD---------------LDEGP--------IIEQVVERVDHSYRPEQLLAVGRDVECITLARAVKAFIERRVFLNGDRTVVFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139405 for 2079 contacts (-67.1/contact) +
2D Compatibility (PS) -28649 + (NN) -1304 + (LL) 8512
1D Compatibility (HY) -9600 + (ID) 2050
Total energy: -172496.0 ( -82.97 by residue)
QMean score : 0.251
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