Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFYASLKSIAMHVPSERVKNAEFQQFLDTSDEWIEKRTGIKERRFANDEEKSSDLGVIAAKQAIERAHLTPQDIDLVVVATLSPDFLAMPSTACVLSAKLGIENKPAFDISAACTGFIYLLSVAKAYVESGMYENVLIVGAEKTSSVLDFKDRGTCILFGDGAGACVIGRTKRLKESVLDVQISANGNFSNYLYTPRTLKPTPFNAKEEALEPFLRMKGNEVFKLAVKTLLKDVETILEKNALKPEDVRLFIPHQANFRIIQAVREHLDFKDEQVVLT-VHKYGNTSAASIPMAMCEAYEEGRLKKGDLMLLDAFGGGLTWGSALVYFGGI |
2QNX Chain:B ((15-330)) | ------LLSVGAYRPERVVTNDEIC--IDSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTT-NTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVVGETP--FQGIGPTVAGSDGEQADAIR--QDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRMPK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QNX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217040 for 2886 contacts (-75.2/contact) +
2D Compatibility (PS) -32727 + (NN) -10080 + (LL) 1360
1D Compatibility (HY) -18400 + (ID) 5700
Total energy: -282587.0 ( -97.92 by residue)
QMean score : 0.529
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