Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSKLFAPTLKEPPKDAVLKSPKHPGKAGYIYQ--IGSGIYNFLPLAKKVLDKIENVTHKRMQEHGAQNILMSFVVLASLWE-KSGRLDKYGKELLVFKDR----KDNDFVLSPTLEENITEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFI-MKDGYSFHEDAESLDKEFLNTQSAYKEILSDLGLDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNCDYAANIEIAKRSKRTEPLMSPSALAKFPTPNTTSAPSVAEFFKTEPYFVLKALVNKVIHKDKETLACFFVRGDDNLEETKALNTLNLLGANALELREANEEDLNKAGLIAGFIGPYGLKKHVCYIIFDEDLKEGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDCCPNCQGALKYHKSLEVGHIFKLGQSYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSVILEQKSDDLGCVWTKNTAPFDVVIVVSNLKD--EAQKKLAFEVYERLLQKGVDALLDDRDARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKILEMLASE |
| 1NJ1 Chain:A ((41-413)) | ------------------SEWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILD-RDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLITRRPP------------------------------------------------WDK---F---------------------------------------------------------PGSE------------------------YT-------VAFD---------------------------------------------TLMPD-------GKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRELMKDI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -162369 for 2933 contacts (-55.4/contact) +
2D Compatibility (PS) -38885 + (NN) -9848 + (LL) 13768
1D Compatibility (HY) -18400 + (ID) 4200
Total energy: -219934.0 ( -74.99 by residue)
QMean score : 0.466
|
|
|