Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSNHMKNKTLVISGAT--RGIGKAILYRFAQSGVNIAFTYNK--NVEEANKIIEDVEQKYSIKAKAYPLNVLEPEQYTELFKQVDADFDRVD-FFISNAIIYGRSVVGGFAPFMRLKPKGLNNIYTATVLAFVVGAQEAAKRMQKIGGGAIVSLSSTGNLVYMPNYAGHGNSKNAVETMVKYAAVDLGEFNIRVNAVSGGPIDTDALKAFPDYVEIKEKVEEQSPLKRMGNPNDLAGAAYFLCDETQSGWLTGQTIVVDGGTTFK |
| 4D44 Chain:B ((29-277)) | -----NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQP---EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSR---EGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDLSSG-VTGENIHVDSGFHAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118820 for 2115 contacts (-56.2/contact) +
2D Compatibility (PS) -26440 + (NN) -7716 + (LL) 404
1D Compatibility (HY) -12400 + (ID) 4150
Total energy: -169122.0 ( -79.96 by residue)
QMean score : 0.527
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