Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKQHIQYFKNLVGGEDFFTDLAHLNAYCYDATK-ERHLPSGVIFPKNEREISQILKYCNEHRLIVVPRGAGSGFTGGALSVSGGLVLSVEKHLDKILEIDTKNLIARVEPGVINKHFQNEVEKLDLFYPPDPASENQSTLGGNVAENAGGMRAAKYGITKDYVMALRVVLANGEIIRAGKKTIKDVAGFNIAGLMIASEGCLGVISEITLKLLAKPPLKQSAMGVFNHIEDAMNAVYKTMSSGVTPVAMEFLDNLSIKAVEERFSKGLPKDAGAILITQVDGVVKEQIAWQLNEI------------EKHFKANGCVGFKIAQNEQEEQDLWFSRRNASQSISVYGKKKLNEDVTVPRASLPSLLQEVAKISQKYGFKIPCFGHTGDGNVHVNIMLE-DPKRDLEKGHKAMEEIFQAAISLEGTLSGEHGIG---LSKAKFMPLAFNHSEMELFRNIKKALDPNNILNPFKMGL-- |
| 2BVF Chain:A ((5-457)) | KLAT------PLSIQGEVIYPDDSGFDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNS--IHIDTAGSRARIGGGVISGDLVKEAAKFGLAAVTGMHP--KVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDDE-----RPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSL----LDALNEMADHIYPSVFVGV---DENRAPSVTVCVGHLGG-LDIAERDIARLRGLGRTVSDSIAVRSYDEVVALNAEVGSFEDGMSNLWIDREIAMPNARFAEAIAGNLDK-FVSEPASGGSVKLEIEGMPFGNPKRTPARHRDAMGVLALAEWSGAAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTAEMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97310 for 3913 contacts (-24.9/contact) +
2D Compatibility (PS) -45723 + (NN) -14260 + (LL) 1880
1D Compatibility (HY) -3200 + (ID) 3350
Total energy: -161963.0 ( -41.39 by residue)
QMean score : 0.330
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