Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYA-------TKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH |
2RAW Chain:B ((7-58)) | ------------------------------------------LKDFDREVEIRIKQIESDR-QNLLKEVDNLYNIEILRLPKALREMNWLDYFAL---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7125 for 162 contacts (44.0/contact) +
2D Compatibility (PS) -4821 + (NN) -2179 + (LL) 4996
1D Compatibility (HY) -4000 + (ID) 450
Total energy: 671.0 ( 4.14 by residue)
QMean score : 0.474
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