Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MAQKTLLIITDGIGYRKDSD---HNAFFHAKKPTYDLMFKTLPYSLIDTHGLSVGLPKGQMGNSEVGHMCIGAGRVLYQDLVRISLSLQNDELKNNPAFLNTIQKSHVVHLMGLMSDGGVHSHIEHFIALALECEKSHKKVCLHLITDGRDVAPKSALTYLKQMQNICNENIQIATISGRFYAMDRDNRFERIELAYNSLMGLNHTPLSPSEYIQSQYDKNITDEFIIPACFKNYCGMQDDESFIFINFRNDRAREIVSALGQKEFNSFKRQAFKKLHIATMTPYDNSFPYPVLFPKESVQNTLAEVVSQHNLTQSHIAETEKYAHVTFFINGGVETPFKNENRVLIQSPKVTTYDLKPEMSAKGVTLAVLEQMRLGTDLIIVNFANGDMVGHTGNFEASIKAVEAVDACLGEILSLAKELDYAMLLTSDHGNCERMKDENQNPLTNHTAGSVYCFVLGNGVKSIKNGALNNIASSVLKLMGIKAPATMDEPLF---------- |
| 2ZKT Chain:A ((1-412)) | MVLKRKGLLIILDGLGDRPIKELNGLTPLEYANTPNMDKLAEI------GILGQQDPIKPGQPAGSDTAHLSI--------------FGYDPYETYRG--------------------------------RGFFEALGVGLDL------SKDDLAFRVNFATLEEEAH------------------------------------------------------------------------------------ERAIQEEVDIGVDFIFKGLVLKGMSK-VGDNDLIRGAGTYPNIPMKFTEQWKVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNTNEMAKAKKAVELLKDY-------------------------DFVFLHFKPTDAAGHDNKPKLKAELIERADRMIGYILDHVDLEEVVIAITGDHSTPCEVMN--------HSGDPVPLLIAGGGVRTDDTKRFGEREAMKGGLGRIRGHDIVPIMMDLMNRSEKFGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63217 for 2833 contacts (-22.3/contact) +
2D Compatibility (PS) -33216 + (NN) -7648 + (LL) 12128
1D Compatibility (HY) -400 + (ID) 2650
Total energy: -95003.0 ( -33.53 by residue)
QMean score : 0.233
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