Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVHQSEMENYNIGQASIEEVSDPAY---KGAKIVVVGVGGGGSNMIKHLVEYGVHQDVTPIATNTDGQHLKNNPAPVKILLGKESTGGLGAGGVPDIGKKAAEESADEIREAIKDAKLVIVSTGLGGGTGTGATPTIVKIAKEVGALTIAIVTKPFKYEGNQKRKRAEEGLKELEQSSDSILVIPNDKILLTMKKNASTTECYREVDDVLVRAVSGISTIITKPGNINVDFADLKSALGFKGFALMGIGEATGEDSAKLAVQNAIQSPLLDDASIEGAKSIIVFFEHHPDYPMMAYSQACDFIQDQAHQDVDVKFGQHTSENIPIDHVRVTIIATGSERNSNGAGLESIATPSQPVVKPTRKVGNGEYLRIPTEEELSIPTTIRIQQD |
| 1W5B Chain:B ((22-341)) | --------------LSPEDKELLEYLQQTKAKITVVGCGGAGNNTITRLKMEGIEGAKT-VAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEK-LFEIVPNMPLKLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLD-VDIDGATGALIHVMGPEDLTLEEAREVVATVSSRLDPNATIIWGATIDENLE-NTVRVLLVITGVQSRIEFTDTGLKRKKLE---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167013 for 2898 contacts (-57.6/contact) +
2D Compatibility (PS) -35697 + (NN) -20054 + (LL) 2232
1D Compatibility (HY) -22400 + (ID) 6750
Total energy: -249682.0 ( -86.16 by residue)
QMean score : 0.579
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