Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFAYSEPCLDEEDKKAVLEVLNSKQLT-QGKYSLLFEEALCEFLGVKHALAFNSATSALLTLYRNFSDFNADRNEIITTPISFVATANMLLESGYTPVFAEVKNDGNIDELALEKLIT---KKTKAIVSVDYAGKSVEIESIQRLCKKYSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNNSELYEKMKLFRSHGMLKKDFFEGEVKSVGYNFRLNEIQSALGLSQLKKAPLLRQKREEVALIYDEIFKDNPYFTPLHPLLKHQSSNHLYPILMHQKF-------------------FTCKKLILESLHKLGILVQVHYKPIYQYQLYQQLFNTAPLKSAEDFYSAEISLPCHANLDLESVQNIAHGVLKTFEGFNRMGFI |
| 1O69 Chain:A ((12-385)) | ------------GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAG-V-KQDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQAREN--CLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEYFSFLDEL--ENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAK-AYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199235 for 3169 contacts (-62.9/contact) +
2D Compatibility (PS) -37912 + (NN) -17470 + (LL) 936
1D Compatibility (HY) -16000 + (ID) 4350
Total energy: -274031.0 ( -86.47 by residue)
QMean score : 0.531
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