Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKSFGVFGNPIKHSKSPLIHNACFLTFQKELGFLGHYHPILLPLES---RIKNEFLHLGLSGANVTLPFKERAFQICDKIKGIALECASVNTLVLENDELVGYNTDALGFYLSLKHQNYQNDQNALILGAGGSAKALACGLQKQGLKVSVLNRSA-RGLDFFQRLGCDCF-MEPPKSAFDLIINATSASLHNE--LPLNKEVLKGYFKESKLAYDLAYGFL-TPFLSLAKELKIPFQDGKDMLIYQASLSFEKFSDSQIPYSKAFEVMRSVF |
2CY0 Chain:A ((4-244)) | -----FAVLGHPVAHSLSPAMHAFAL----ESLGLEGSYEAWDTPLEALPGRLKE--VRRAFRGVNLTLPLKEAALAHLDWVSPEAQRIGAVNTVLQVEGRLFGFNTDAPGFLEALKAGGIPLKGPALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKAREA-RLLVNATRVGLEDPSASPLPAEL----FPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTGLPMLAWQGALAFRLWTGLLPDPSGMEEAARRAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155144 for 2053 contacts (-75.6/contact) +
2D Compatibility (PS) -24327 + (NN) -3657 + (LL) 1492
1D Compatibility (HY) -19200 + (ID) 4450
Total energy: -205286.0 ( -99.99 by residue)
QMean score : 0.459
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