Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKT--NTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKD-VPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGN--QINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
1UTE Chain:A ((3-304)) | PTPI-------LRFVAVGDWG---------GVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYF---------TGVHDAKDKRFQETFEDVFS----DPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS--------------------------------QQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5922 for 2670 contacts (2.2/contact) +
2D Compatibility (PS) -32013 + (NN) -13296 + (LL) 4812
1D Compatibility (HY) -1600 + (ID) 2300
Total energy: -38475.0 ( -14.41 by residue)
QMean score : 0.285
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