Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQKIVVALGGNAILSSDASAE--AQRSALEETAEYLVQFIENGDDLIISHGNGPQVGNLMLQQHAGASEKNPAMPLDTCVAMTQGSIGYWMQNALDKAFLKHGLDKVAVSLITQVVVDKDDPAFEKPTKPIGPFLNKEEAEKEMAETGAIFLEDAGRGYRKVVPSPRPLSIKEHQIIKQLVDSGVVTISAGGGGVSVVENGLDLSGVETVIDKDFASEKLAELIDADLLVILTGVENVYINYNQPNQKKLEQVTVSELEKYIDEKQFAAGSMLPKIEAATAFVKERPHAKAIITSLENIGAMLERGAGTVIVAG |
3KZF Chain:B ((6-315)) | --KTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAAGV-SPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTE------------ILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACI--KKPDERKLEEIKLSEILALEKDGHF--GSMGPKVRAAIEFTQATGKM-SIITSLSTAVDALNGKCGTRII-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141579 for 2488 contacts (-56.9/contact) +
2D Compatibility (PS) -31667 + (NN) -14739 + (LL) 1632
1D Compatibility (HY) -25600 + (ID) 6200
Total energy: -218153.0 ( -87.68 by residue)
QMean score : 0.557
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