Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQLKGLPVEDGFRM-PGEYEPHIGCFMIWPERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFVSPNQYKNARKELPDTIRVIEMS-N-DDAWIRDYGPSFLVDDKGD-MRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDF-ILEGCSIHVDGEGTLVTTEECLLSEGRNPNL-TKIEIEQTLKKYFHAQKVIWLKHGFYLDE-TNGHVDN-IFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANKTDAKGRTFIIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLF-DDPKDKDAQELLEKLYPDRKIVGIK-AREILLGGGNIHCITQHLPDKSTIRE |
| 1VKP Chain:A ((5-376)) | ----RESPAEHG-YYMPAEWDSHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCASPAQWENARKQLPEDIRVV--EMSMNDSWFRDSGPTFIVRKRNRNIAGIDWNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQ--HSMILEGGSIHVDGEGTCLVTEECLLNKNRNPH-MSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMC-CFARPGVVLLSWTDDETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157003 for 3115 contacts (-50.4/contact) +
2D Compatibility (PS) -39692 + (NN) -20364 + (LL) 1676
1D Compatibility (HY) -28000 + (ID) 9200
Total energy: -252583.0 ( -81.09 by residue)
QMean score : 0.495
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