Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKTMRDSNIEVLYLEKLAAEALREANNKESFLTKMIKESNQMDESALYVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHL----NEMMDEQYPFFLDPLPNLYFTRDPAAVIGNGVTINRMFQPARRRESIFIELILKHHPRFSNQDIPVWS----GRGEPFSLEGGDELVLNEETVLVGVSERTDARAVERLAESLFNRSPK-IKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIYILEKSENG---LE-ITPRRDFQRVIAEVLDEPEIDFIPCGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCMTMPLVRENLK |
| 2A9G Chain:A ((6-416)) | ----TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYL-GHSSFLLPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMGERSSRQAIGQVAQSLFAK--GAAERVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVV---KEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAESLGLKKLRVVETG--------REQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITISASELGRGRGGGHAMTCPIVRDPI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193443 for 3449 contacts (-56.1/contact) +
2D Compatibility (PS) -42387 + (NN) -22946 + (LL) 1124
1D Compatibility (HY) -30800 + (ID) 6650
Total energy: -295102.0 ( -85.56 by residue)
QMean score : 0.488
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