Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPLFTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVVIILLTISDSIVGFILVPGLNFKYDEIFNELLPTLIYCAGMLANLLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVLKINTLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVFRHDYVNILSTLVGYIDNNDMPGLKYYFENNIVPINKTIESNNYKISLLQNIHVIELKGLLAVKLIRAQELKIDAILEVVEPIDKISMDSIDLCKVVGILLDNAVEAALTCENPVIRIAFVK----------KGDSIIIVFANSLPV-NMPPIYKIFEEGFSTKGEGRGLGLASLREIMKKYSHVALDTKV--TDREVIQELEIM |
1R62 Chain:A ((217-347)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPE-GGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGI--------------------GLGLSIARNLIDQHSG-KIEFTSWPGHTEFSVYLPI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67546 for 668 contacts (-101.1/contact) +
2D Compatibility (PS) -10415 + (NN) 957 + (LL) 31864
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -47240.0 ( -70.72 by residue)
QMean score : 0.550
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