Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTASVFVAGKLLPETMEALSKWDVKAFSGEENITEAELINNVTEVDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARR-------ISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNII-YSGHQPKEAAKEWNAEFVSQ-KELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIGEDFAKLD--NVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
| 1HKU Chain:A ((83-341)) | ------------------------------------------------------------LEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRV--QSVEQIREVASG---AARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114167 for 1860 contacts (-61.4/contact) +
2D Compatibility (PS) -27562 + (NN) -16146 + (LL) 5892
1D Compatibility (HY) -16800 + (ID) 5400
Total energy: -174183.0 ( -93.65 by residue)
QMean score : 0.521
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