Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLKINTTTFNPQILYIANCYTNEVRVGENHHHDFLEISIICEGNVIYDIEGERVKLGKGDMLIFN-PGVSHYDITEPGMTNAQLHIGFRNFALEGYTRNTFPFKKAFLRKKEEESAILSISKQIIEEKDAGKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLTRAEELLKNKDVSVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKSS-- |
| 3GBG Chain:A ((4-273)) | KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSG---------IAKLIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGNKDLLLWN--------CEHNDIAVLSEVVNGFREINYS--DEFLKVFFSGFFSKVEKKYNSIFITDDLD---AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36703 for 1925 contacts (-19.1/contact) +
2D Compatibility (PS) -27598 + (NN) -11511 + (LL) 2572
1D Compatibility (HY) -12800 + (ID) 1650
Total energy: -87690.0 ( -45.55 by residue)
QMean score : 0.337
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