Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKLDLWKWEMLLQGREFRNKTNDNWQKLMDWSDFISTGLSAIYVYVNKADATLNNKIDTVDKAVNARVNELISG--TEQLSEVVDARSDAFGARYPVLRERLNQEQLNFSKKSTIQFDASTIISMEKQDIGLLTSKKISEAQTVCFLNISSLDEEADIVLEKTGETSFSDNLTSLVFAKIGTNERYQMEPVGA--------------------------------------------- |
| 1DIO Chain:A ((1-551)) | MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSDFDLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAG------MGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRN--GLEVVKALAQGGFTDVAQDMLNIQKAKLTG----DYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33199 for 1113 contacts (29.8/contact) +
2D Compatibility (PS) -17928 + (NN) 5387 + (LL) 904
1D Compatibility (HY) 800 + (ID) 1750
Total energy: 20612.0 ( 18.52 by residue)
QMean score : 0.122
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