Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDA--S-GSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPN-LVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPALSTGNPNTGTK-QDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGL--VGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNT-RSVTPNADITAVTEDAKSRIEGVINETIGLA-NKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQQYLSNQTYFLQIS-GLKYTFTDTDDLDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKAN--LVTAIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 3IVE Chain:A ((4-500)) | -------------------------------------AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKA----KN-----KATWFFDAGDYFTGPYI-SSLTKGKAIIDIMNTMPFDAVTIGNHEFDHGWDNTLLQLSQ-----------------AKFPIVQGNIFYQNSSK-SFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSM---DVRRALDKDIQTA------SQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKEKPHNFTV-KNFELKTIYADEWKPDQQTKQVIDGWNKKLDEVVQQTVAQSPV--ELKR--------AYGESASLGNLAADALLAAAG---KNTQLALTNSGGIRNEIP------AGAITMGGVISTFPFPNELVTMELTGKQLRSLMEHGASL-SNGVLQVSKGLEMKYDSSKP---VGQRVITLTLNGKPIEDATVYHIATQSFLADGGDGFTAFTEGKARNITGGYYVYHAVVDYFKAG----NTITDEQLNGMRVKDI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96430 for 4439 contacts (-21.7/contact) +
2D Compatibility (PS) -53217 + (NN) -24735 + (LL) 10072
1D Compatibility (HY) -15600 + (ID) 5700
Total energy: -185610.0 ( -41.81 by residue)
QMean score : 0.508
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