Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRIVDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLNEALFDMLQSE------EAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKDMIALNKKLKDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPI---------DYYTNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGNYLFFFPSF-----------LYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERF------QAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYY--NETIGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS |
| 2QYU Chain:A ((8-627)) | ATSSPSSPADWAKKLTDAVLRQKA-GETLTAADRDFSNADFRNI---TFSKILPPSFMERDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVV------------CSNTKFS-NSDMNEVFLQYSI---------------TTQQQPSFIDTTLKNTLIRHKA----------NLSGVILNEPDNSSPPSVSGGGNFIRLGD-----------IWLQMPLLW----------------------TENAVDGFLNHEHNNG---KSILMTID----------------SLPDKYSQEKVQAMEDLVKSLRGGRLTEACIRPVESSLVSVLAHPPYTQS---------------------ALISEWLGPVQERFFAHQCQTYNDVP---------------------LPAPDTYYQQRILPVLLDSFDRNSAAMTT--------HSGL--FNQVILHCMT------GVDCTDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSP-DWTTRA---ADNFLLLSSQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHDFPVFLAAF---NQQATQRRFGELIDIILSTEEHGELNQQFLAATNQKHSTVKLIDDASVSRLATIFDPLLP-------EGKLSPAHYQHILSAYHLTDATPQKQAETLFCLSTAFARYSSSAIFGTEHDSPPALRGYAEALMQKAWELSPAIFPSSEQFTEWSDRFHGLHGAFTCTSVVADSMQRHARKYF---------PSVLSSILPLAWA---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146415 for 4662 contacts (-31.4/contact) +
2D Compatibility (PS) -59686 + (NN) -3281 + (LL) 16244
1D Compatibility (HY) -16800 + (ID) 4750
Total energy: -214688.0 ( -46.05 by residue)
QMean score : 0.283
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