Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQ-FTKENKEDNIIQRMLGGEVVALVSDAGMPSISDPGYELVQSALDANIPVIPLPGANAALTALIASGLAPQPFY-FYGFLPRQNKERTQAIEKLAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMKARNLPKREVYSAYHEIK |
| 1VE2 Chain:A ((1-224)) | -----------MRGKVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDRL-VHPGVLALAKGELVPV----KTPQEAITARLIALAREGRVVARLK-GGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHDPA----LPLPRADTLVLLM------GLKERLLERFPPETPLALLARVGWPGEAVRLGRVEDLPGLGE--GLPSPALLVVGKVVGL------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106896 for 1698 contacts (-63.0/contact) +
2D Compatibility (PS) -22417 + (NN) -10090 + (LL) 6876
1D Compatibility (HY) -6000 + (ID) 2200
Total energy: -140727.0 ( -82.88 by residue)
QMean score : 0.422
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