Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVINTRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD
3DDC Chain:B ((6-163))
--------PPTIQEIKQKIDSYNSREKHCLGMKLSEDGTYTGFIKVHLKLRRPVTVPSFYLPLDAIKQMHISSTTT--VSEVIQGLLDKFMVVDN-PQKFALFKRIHKDGQVLFQKLSIADYPLYLRLLAGPDTDVLSFVLKEN--------
General information:
TITO was launched using:
RESULT:
Template:
3DDC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26489 for 895 contacts (-29.6/contact) +
2D Compatibility (PS) -14246 + (NN) -6019 + (LL) 2104
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -48700.0 ( -54.41 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_3DDC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DDC-query.scw
PDB file :
Tito_Scwrl_3DDC.pdb
: