Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGD--GRLGT------------------NAIMIADNIATCTNSEHIYIFCDI-GSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
3CT4 Chain:A ((48-134))
----------------------------VALVSGGGSGHEPAHAGFVGEGMLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEM-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32110 for 329 contacts (-97.6/contact) +
2D Compatibility (PS) -6403 + (NN) -5899 + (LL) 6324
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -41038.0 ( -124.74 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_3CT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CT4-query.scw
PDB file :
Tito_Scwrl_3CT4.pdb
: