Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKKYEPLNLYTNFKKSAERYPEMPIHFDEELVTFPELGLHSTYKKCEEAIIQKAAHLHKFGVRKEEKVIVYKSAKFDSYILAVAISYIGAVPIMVSPHLPASTIDIFVNRLDQPWLLFDSETSDKSHQLNNLPDSRLINAEQLFKAPLDGYTCEQEELPKDMIAYMTHTSGTTGVPKLIAHSANSMGWRTKYQRRILNFIKPRGLVAFHISPVHSRFNIGVSSLMSLGFPLLPIANP---SKANVEKVLREYKPYVLETHPNHFVQWASLAREKPDVFQSIKFYHSTFDAINKETMAVFLRTSEYKKPLFLQIYGQSECGPMILRGHTLQSIETLNARDMGIGVPGLTEVRIVDQDGNPVPAGVSGNIQMLSKGRALTYYKEEARFEENVY-------GPWWDSGDYGMKDEKGRLFLQDRQVDLVETIDS---TLAIEDKLLDTLTFLDEVVIIRGEN--GSPQPIIAVHNDGEMNWDAWWKAV-SDLPHMNEP-MVMKYDEIPRTATMKVQRLQMERELKK |
| 1AMU Chain:A ((38-526)) | -------DKTIHQLFEEQVSKRPNNVAIVC--------ENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEEDTIKIRE---GTNLHVPSKSTDLAYVIYTS-----PKGTMLEHKGISNLKVFFENSL-NVTEKDRIGQFASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLD------PERILSIQTLITAGSATSPSLVNKWKEK-----VTYINAYGPTETTICATTWVATKE-TIGHSVPIGAPIQ-NTQIYIVDENLQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLK-HMYISETAVSVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYFIQLDKMPLTSNGKIDRKQLPEP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230114 for 4020 contacts (-57.2/contact) +
2D Compatibility (PS) -49071 + (NN) -14894 + (LL) 2556
1D Compatibility (HY) -8400 + (ID) 3550
Total energy: -303473.0 ( -75.49 by residue)
QMean score : 0.462
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