Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNVLFIKANGLPAERSVSVALYEIFLTEYKKSHPDDNVTELDLFEADLPYYDVTMMSGLHKEAAG-----ETLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNFSIPAQFLTYLFYLNQAGKTFKYTANGPVGLVADKKIALLNARGGIYSDGPMQSFEMSLNYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF
3W7A Chain:A ((2-211))
-TKVLFITANPNSAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAAWG--KFAAGEGFEALTEVQQQKVAAMNTNLETFMNADRYVFVTPMWNFSYPPVVKAYLDNVAIAGKTFKYTENGPVGLLEGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVLGFVGVNDTEYIAVEGMNANPEKAQEIKEAAIANARELAKRF
General information:
TITO was launched using:
RESULT:
Template:
3W7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128604 for 1578 contacts (-81.5/contact) +
2D Compatibility (PS) -21935 + (NN) -9551 + (LL) 376
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -178264.0 ( -112.97 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3W7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W7A-query.scw
PDB file :
Tito_Scwrl_3W7A.pdb
: