Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFAKGAGMFEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKLRDSIK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4YCZ Chain:B ((66-928)) | SEYRYAALAKDAYQQMGTAPVTEPPQVILGTEDLLSRLYDEKMDDTLATAAAQLAALWREHVDETPFEKANYLANLALQIHHPLPQTLFRWLNEYHMYGSQVDDILRHRPSPACHSLFWQAVFIALKVGDAARLLDQAGWGHVYAYVNVQRAVDETIAVLESCPTLFRVRARGLLEHLRRFAEGWEIYENLNIVFDIVLGQQGAILEAAQ-------DWLEATVGLANSESYLDRLARAFHTAVESDFVEIGMACVFEDNIKGVIGLLRGWSLPIAAAVAEIASLGKWLEVDGIKDSTLVQYAQALADYEGLSSVQDRDGWELSISVLGRMPERSEEMVRDLVEHLVQQLHVDSNATVDRLWFLLNELGMIEFAEDTTETYGDILARDSHRYGEAMWYYALAHRPNKVREVMNLLTSYSLIQPPANDLDDYLYKLLNDRKNTLEQCASQDMEAAELLGKMLSGYASLRQFYDIRPHATPLSRRKQAATALISVIASSDDEDFLLALLGEALVFVSDPTLDQIDVLLKAIEDLQAVGSRVYNACDEFLQLVLASAPGGSSLVASQLQRSLSGTGGEDIMRRLRLGLAKDLAGLWLAEA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 12423 for 520 contacts (23.9/contact) +
2D Compatibility (PS) -10501 + (NN) -2554 + (LL) 380
1D Compatibility (HY) 1600 + (ID) 350
Total energy: 998.0 ( 1.92 by residue)
QMean score : 0.326
|
|
|