Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKES-----GIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPV-----------------KGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGK-----LLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF
4GAC Chain:B ((3-303))----SSVLLHTGQKMPLIGLGTWKSEPG-QVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLG---PDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWR----------


General information:
TITO was launched using:
RESULT:

Template: 4GAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135438 for 2170 contacts (-62.4/contact) +
2D Compatibility (PS) -28224 + (NN) -10829 + (LL) -376
1D Compatibility (HY) -24800 + (ID) 5450
Total energy: -205117.0 ( -94.52 by residue)
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_4GAC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GAC-query.scw
PDB file : Tito_Scwrl_4GAC.pdb: