Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIINENEQLVAETVSRRIIELVKEKPASLICIAGGDTPLLTIEALIKANQAGEVDFSNTQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICFFDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDDVT-KRVMSKYFDT-DLPLTHGISLGMQQILAAKEIFLVATGEKKIDIVKQVVEKEPTVAIPATLVK-DSNTMLVVDKIAASGVEA
2RI0 Chain:A ((2-234))
MKTIKVKNKTEGSKVAFRMLEEEITF-GAKTLGLATGSTPLELYKEIRES----HLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAK-PFKKSYLPNGLAA-DL-AKETEYYDQILAQ-YPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAAN-SRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI--
General information:
TITO was launched using:
RESULT:
Template:
2RI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -208781 for 1944 contacts (-107.4/contact) +
2D Compatibility (PS) -24410 + (NN) -7458 + (LL) 1016
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -253033.0 ( -130.16 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_2RI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RI0-query.scw
PDB file :
Tito_Scwrl_2RI0.pdb
: