Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLITTENKLAGSKKALEIIEKGITSGEVN-----TLGLATGSTPETLYAELVKSD----VDTKNVTTTNLDEYVGLAASDPNSYHYYMNDLLFSKKAFKES--FLPNGEATDAEAECARYEEILSEHP-IDIQVLGIGTNGHIGFNEPGTSFDSITHKVVLTDSTREANKRFFE-REEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQNHPDVTVILDNEAASLL---------------------------------- |
| 1NE7 Chain:A ((1-281)) | MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKETEKSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98661 for 2047 contacts (-48.2/contact) +
2D Compatibility (PS) -25733 + (NN) -15229 + (LL) 0
1D Compatibility (HY) -16400 + (ID) 4350
Total energy: -160373.0 ( -78.35 by residue)
QMean score : 0.587
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