Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI
3N79 Chain:A ((2-160))
----------------------------------------SQAIGILELTSIA-KGMELGDAMLKSANVDLLVSKT---I----SPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSV------LPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHM---AFGIGGKCYMVVAGDVSDVNNAVTVASESAGE-----------------
General information:
TITO was launched using:
RESULT:
Template:
3N79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79589 for 1342 contacts (-59.3/contact) +
2D Compatibility (PS) -16932 + (NN) -7856 + (LL) 3920
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -109307.0 ( -81.45 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_3N79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N79-query.scw
PDB file :
Tito_Scwrl_3N79.pdb
: