Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQ--TASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQ-ESGRWNDYGPELMRLKDR----ASRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFI-MKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSDASDYAANTEMAPVLYMEKKSHELEKDLEKVATPDQKSITDIVGFLEVPIEKTMKSMLYQVDDEVIMVLVRGDHEVNDIKIKNALDATNVELVDPAVAVELLGANFGSLGPINVPENMRVFADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKS--EEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTLPILFGDK |
| 1NJ1 Chain:A ((43-414)) | --------------------WFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILD-RDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLITRR--------------------------PP-------WD-------------------KF-----------------------------------------------------PGS--------------------EY---------TV------------------------------AFD-------------TLMP--D-----GKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRELMKD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176927 for 2911 contacts (-60.8/contact) +
2D Compatibility (PS) -38769 + (NN) -11392 + (LL) 13736
1D Compatibility (HY) -23200 + (ID) 4600
Total energy: -241152.0 ( -82.84 by residue)
QMean score : 0.470
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