Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASGRGITE----KIYKDFLE-LGANAVTLGNHTWDN--RDIFEFIDEAKYLVRPANFPDDTTPG-----TGMVFVKSNQHEIAVINMQGRTFLAD---------LDDPFRKMDYLIEEAKKR-TNIIFVDFHAETTSEKEAMGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRFKTALPTRFEVPKTGRAVLSGCLITLDES--TGKAQKIDRILINEDHPFSFD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3ZTV Chain:A ((8-573)) | HKAVELSILHINDHHSYLEPHETRINLNGQQTKVDIG------GFSAVNAKLNKLRKKYKNPLVLHAG-DAITGTLYFTLFGGSADAAVMNAGNFHYFTLGNHEFDAGNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEKNIEIAQK-VND-IDVIVTGDSH------YLYGNDELRSLKLPVIYEY---------PLEFKNPNGEPVFVMEGWAYSAVVGDLGVKFSPEGIASITRKIPHVLMSSHKLQVKNSEGKWAELTGDERKKALDTLKSMKSISLDDHDAKTDKLIAKYKSEKDRLAQEIVGVITGSAMPGGSANRIPNKAGSNPEGSIATRFIAETMYNELKTVDLTIQNAGGVRADILPGNVTFNDAYTFLPFGNTLYTYKMEGSLVKQVLEDAMQFALVDGSTGAFPYGAGIRYEANETPNAEGKRLVSVEVLNKTQQWEPIDDNKRYLVGTNAYVAGGKDGYKTFGKLFNDPKYEGVDTYLPDAESFIKFMKKHPHFEAYTSSNVKFNAST |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95163 for 1936 contacts (-49.2/contact) +
2D Compatibility (PS) -26721 + (NN) -10782 + (LL) 1544
1D Compatibility (HY) -10800 + (ID) 2150
Total energy: -144072.0 ( -74.42 by residue)
QMean score : 0.400
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