Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MADKRQSNNR--RIKQNLVEGSRSQQNT------------KRKKTNLVLNVLII-------VVSLLIIGSLY-------FVLFKTESD-------------PAQQEN------KTASSTAKKEDAAKSSEKKKDSS-DDKTTETTESDDPNVAK---VITKDWKPIGTEQTGDHVNSYSSTSVDW------QEKRKA-FSVATDIPVSNTSLWFVEQGADPATQAIGTL-STKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR---- |
| 4L5C Chain:A ((24-312)) | KVKVGIIGGSGFDDPNLFKKVGVRQVTTPFGKPSDTLVEGFVGDVACVVLPRHGKGHLIPPSEVNYRANVWALKDLGCTHILATNACGSLQEDLVPGDFVVLNQFMDKTWGRENTFYGSKPDSLKGVLHMPMAEPFCERTRQILIQAARNKSINVYDKKTMDKSACIHPCVHAEGSAVTINGPRFSTRCESFIHKAMGLDIVNMTLVPEVSLAREAGLSYASIAIVTDFDCWKSEEEHVCVDMVLEQFRKSVVHVREILLEAVALIGAEDWTKTIEANKALVMSSRQDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50434 for 1398 contacts (36.1/contact) +
2D Compatibility (PS) -21174 + (NN) -1005 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: 21305.0 ( 15.24 by residue)
QMean score : 0.190
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