Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
1XD7 Chain:A ((6-132))
----SRLAVAIHILSLISM---DEKTSSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGASL-KKDPADISLLEVYRAVQKN-PKCPVGKKIQNALDETFESVQRAMENELASKSLKDVMN---------------
General information:
TITO was launched using:
RESULT:
Template:
1XD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40025 for 766 contacts (-52.3/contact) +
2D Compatibility (PS) -12764 + (NN) -4917 + (LL) 1816
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -62640.0 ( -81.78 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_1XD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XD7-query.scw
PDB file :
Tito_Scwrl_1XD7.pdb
: