Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
4C3K Chain:D ((1-112))
---MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGR--------------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI------
General information:
TITO was launched using:
RESULT:
Template:
4C3K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61423 for 651 contacts (-94.4/contact) +
2D Compatibility (PS) -10917 + (NN) -6424 + (LL) 928
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -85636.0 ( -131.55 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_4C3K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C3K-query.scw
PDB file :
Tito_Scwrl_4C3K.pdb
: