Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEKIEAIPKTQW-LVLAPSHELVMQITEVIRSWLPSDDLTVISLIGGANVKRQIEKLKKKPQIIVASPGRALE-LIKQKKIKMHEIKTITLDECDQLLRQENFKSTLEIVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLVFVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRPPKQVQKSKKDDGKKPFRKDKPTGAAGGRKEKPTNSAKPTRNKPNKFNKKPNNFKKS |
| 3BER Chain:A ((49-226)) | ----GVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73693 for 1392 contacts (-52.9/contact) +
2D Compatibility (PS) -19273 + (NN) -10637 + (LL) 15560
1D Compatibility (HY) -10400 + (ID) 2850
Total energy: -101293.0 ( -72.77 by residue)
QMean score : 0.532
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