Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEIGMQEVTVD--EFGYVMATLPSNSTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGKDIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAM----NHLINHPE-IKHGKIRIAFTPDEEIGR--GPERFDVEAFGAKYAYTMDGGPLGELEYESFNAASAKITFKGNSVHPGTAKNKMVNAVKMAMEFDARIPKDEAPEYTEGYEGFYHLISLNGD------VEQARSYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEIVDIVSAAMRNLDIEPKISPIRGGTDGAQLSYKGLPTPNIFGGGE-NFHGKFEYVALESMVKATEVIIEVARLFEEKE |
2RB7 Chain:A ((5-360)) | -MQHIVELTSDLIRFPSMHSRP-------EQISRCAGFIMDWCAQNGIHAERMDHDGIPSVMVL-PE---KGRAGLLLMAHIDVVDAED---------DLFVP-RV----------------------ENDRLYGRGA----NDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALP-LIRADYVVALDGGNPQQVITKEKGIIDIKLTCTGKAAHG-ARPWMGVNAVDLLMEDYTRLKTLFAEENEDHWHRTVNLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSGT--------VSIVR--TVPVF---LAADSPYTERLLALSGA-----TAGKAHGASDARYLGENGLTGVVWGAEGFNTLHSRDECLHIPSLQSIYDPLMQLAREMEE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50665 for 2906 contacts (-17.4/contact) +
2D Compatibility (PS) -36288 + (NN) -12808 + (LL) 3136
1D Compatibility (HY) -10000 + (ID) 3200
Total energy: -109825.0 ( -37.79 by residue)
QMean score : 0.422
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