Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQ-AISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK |
2VXO Chain:A ((42-222)) | ---------------------------GKVIDRRVRELFVQSEIFPLETP--AFAIKEQGFRAIIISGGP-----------APW--------------FDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK---------------------VFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGN-IVAGIANE--SKKLYGAQFHPEVGLT--ENGKVILKNFLY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71616 for 1226 contacts (-58.4/contact) +
2D Compatibility (PS) -16273 + (NN) -4328 + (LL) 5540
1D Compatibility (HY) -11600 + (ID) 1700
Total energy: -99977.0 ( -81.55 by residue)
QMean score : 0.368
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