Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMP--EGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMM--ASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ
1Z6G Chain:A ((22-209))
---NIYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEANLLNFNLSIINDDLTLTYQQLKNYLLNSY------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61439 for 1361 contacts (-45.1/contact) +
2D Compatibility (PS) -20473 + (NN) -11802 + (LL) 2232
1D Compatibility (HY) -14800 + (ID) 2900
Total energy: -109182.0 ( -80.22 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6G-query.scw
PDB file :
Tito_Scwrl_1Z6G.pdb
: