Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKKIVLLLALITVVLTVGACSDNKKETEEKANKTEEESATFLTTISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYNTDKASEKSRDNMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE
3EMX Chain:A ((224-347))
SLSYVKEGLAVLE--------------------------DGRLIYITPEEFRQLL--QGDAILAVYSKTCPHCHRDWPQLIQASKEVDVPIVMFIWGS-LIGERELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIY-----
General information:
TITO was launched using:
RESULT:
Template:
3EMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52485 for 947 contacts (-55.4/contact) +
2D Compatibility (PS) -13383 + (NN) -7867 + (LL) 1860
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -77325.0 ( -81.65 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_3EMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EMX-query.scw
PDB file :
Tito_Scwrl_3EMX.pdb
: