Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHIALIAHDEKKDLMVGFATAYKHLLEPHQLYATGTTGLRIIEATGLTVHRFKSGPLGGDQQIGARISENKMDLVIFLRDPLTAQPHEPDVTALIRLCDVYEIPLATNIGTAEILIRGLGAG------FLDWRDLRRNDE
1VMD Chain:A ((29-166))-RIALIAHDRRKRDLLEWVSFNLGTLSKHELYATGTTGALLQEKLGLKVHRLKSGPLGGDQQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRSTADFLISSPLMNDVYEKIQIDYEEELERR-


General information:
TITO was launched using:
RESULT:

Template: 1VMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -91993 for 987 contacts (-93.2/contact) +
2D Compatibility (PS) -14472 + (NN) -7331 + (LL) 312
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -127084.0 ( -128.76 by residue)
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_1VMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VMD-query.scw
PDB file : Tito_Scwrl_1VMD.pdb: