Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEITVRAKSKTYPVYINEFALE--DIREKWTKSLAKFSHVFVLTDGHVAELHKAKLDAVLAD-LPV------VTYYVAPNGEEAKTFRVYEDVMTKMIETG--LDRKAVLIAFGGGVIGDLGGFVAATYMRGIPFYQVPTTVLA-HDSAVGGKVAINHPLGKNMIGNFYQPEAVIYDTQFFATLPERELRSGFAEMIKHALISDLTLLRALMDTFTEPKD--------------FYTKDLTPFLQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYALTMSETIYGLDF-DLAEFKTWLEQLGYDTTFDA-SV---------PFSKILENMRHDKKTTFNEISMVLLEEIGKPVIF--K-ADDDLIFETYKRVMRKGGNVI |
| 1SG6 Chain:A ((10-392)) | ---------LGRESIIADFGLWRNYVAKDLISDC--SSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSA-----GLRNLLNWGHSIGHAIEAILTP-QILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKK-------IVLLSAIGTPYETRASVVANEDIRVVLA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214116 for 2840 contacts (-75.4/contact) +
2D Compatibility (PS) -35788 + (NN) -14422 + (LL) 2452
1D Compatibility (HY) -25200 + (ID) 5350
Total energy: -292424.0 ( -102.97 by residue)
QMean score : 0.607
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