Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKA-DLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGDDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWYMLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLLLSEQLSKLFTI |
3NN1 Chain:A ((136-212)) | ----------YAIVIPIKK-DAE-WWALDQEARTALMQEHTQAALPY-----LKTVKRKLYHSTGLDDVDFITYFETERLEDFHNLVRALQQVK-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24308 for 420 contacts (-57.9/contact) +
2D Compatibility (PS) -8024 + (NN) -3768 + (LL) 11408
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -29142.0 ( -69.39 by residue)
QMean score : 0.412
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