Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVTVWNEFLHEKEDDAVLAIYPDGIHGQIASFLEKAGIEAGTATLEEPEHGLT-------EEVLANTDVLIWWGHMGHDRVEDKIVDRVQKRVLEGMGLVVLHSGH----MSKIFMRLMGTSCD----------LKWREANERE----------------RLWVVDPTHPIAKGIGEFIELDEEEMYGE-HFDIPTPDELIFLGWFEG----GEVFRSGITYKRGNGRIFY----FQPGHESYPTY-HHPDIQQVIINGVHWCAEGRKNYPAYGNHQPLEKIGRK------ |
| 4E5V Chain:A ((2-281)) | -----------RKPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVL--DYNGDSWPEETNRRFLEYVQNGGGVVIYHAADNAFSKWPEFNRICALGGWEGRNENSGPYVYWKDGKLVKDSSAGPGGSHGRQHEYVLNGRDKVHPVVKGLPLKWRHAKDELYDRMRGPGNIRDILYTAYSDKETNGSGREEPLVFTVDYGNARIFHTMLGHAGATTEDNIAMQCTGFQVLLLRGAEWAATGKVTQKVPKDFPTETTCSYRKDYKEN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86495 for 1803 contacts (-48.0/contact) +
2D Compatibility (PS) -24155 + (NN) -7133 + (LL) 1268
1D Compatibility (HY) -1600 + (ID) 1700
Total energy: -119815.0 ( -66.45 by residue)
QMean score : 0.471
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