Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAILNQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN
1HIW Chain:A ((8-122))
---VLSGGELDKWEKIRLRPGGKKQYK---LKHIVWASRELERFAVNPGLLE---TSEGCRQILGQLQPSLQT---GSEELRSLYNTIAVLYCVHQRI-------DVKDTKEALDKIEEEQNKSKKKAQQAAAD----------
General information:
TITO was launched using:
RESULT:
Template:
1HIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25947 for 789 contacts (-32.9/contact) +
2D Compatibility (PS) -11925 + (NN) -453 + (LL) 2344
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -38081.0 ( -48.26 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_1HIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HIW-query.scw
PDB file :
Tito_Scwrl_1HIW.pdb
: