Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKNYKAYLIDLDGTMYRGAEVIPEAIIFIENLKRAGLPYLFVTNNSTKTPGQVAEHLTDMGIQAVSDDVFTTSQATVQFMMEQKREKTVYVIGERGIKQELTDNGFEITSSNPAFVVVGLDREVDYEKFSKAALAVRGGAMFISTNGDAAIP-TERGLLPGNGSITSVVSVATETAPIFIGKPESIIMEQALAKLGVHKDEAIMVGDNYETDIMAGINYGMDTLIVHTGFTSKEALLTKEIQPTYAVTKLTDWEFN |
3PDW Chain:A ((3-256)) | LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQAIEENGLTFGGENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIAIPTER-GLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTG------MTDDMEKPTHAIDSLTEWIP- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140211 for 2167 contacts (-64.7/contact) +
2D Compatibility (PS) -26879 + (NN) -9841 + (LL) 488
1D Compatibility (HY) -24800 + (ID) 7350
Total energy: -208593.0 ( -96.26 by residue)
QMean score : 0.549
|
|
|