Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKASTDFV-DIEIDKPVPENHDLLVKIKAISINPVDTKQREAAKL--SGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDV--TRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIATQLAANTGLEVIATASRSETVEWTKSHGANYVINHRENIPEQLEELG-FKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPVEMTLLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTL-NQVLSPVNAATIEEAHKIISSGK----MIGKLVVKGFE |
| 3GAZ Chain:A ((8-336)) | MIAAVVEEANGPFVLRK-LARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQ---DGQTVLIQGGGGGVGHVAIQIALARGARVFATARG-SDLEYVRDLGATPIDASREP-EDYAAEHTAGQ-GFDLVYDT-LGGPVLDASFSAVKRFGHVVSCLGWGTH-KLAPLSFKQATYSGVFTLHTLLAN-EGLAHFGEMLREADALVQTGKLAPRLDPRTF-SI--AEIGSAYDAVLGRNDVPRQRGKIAITVE- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GAZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140988 for 2945 contacts (-47.9/contact) +
2D Compatibility (PS) -33981 + (NN) -3314 + (LL) 720
1D Compatibility (HY) -13600 + (ID) 4700
Total energy: -195863.0 ( -66.51 by residue)
QMean score : 0.450
|
|
|