Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLHAMWDEYPALSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIHAGGKLLRPAF--ALLSAQAG-PDYDKDRA--VSIAAALEVLHMATLIHDDV--VDDSPLRRGIPTIHSKYGRNYAVYTGDYLFCICFKILS-----AHASSVENIEFNSKN--IEKILMGE-LDQMRTSYKMNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYN-IGHYLGMAFQIIDDVLDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMKGHLAEFEPLLSQKLDMTDEASEQVLALISKYKGVEQAFKLAKKYTNKALREIKKLPAGAYREDMYRLTKNILDRDI |
3Q1O Chain:D ((42-251)) | ---------------------------------YLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNALLESHI-IVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHE--HKTAKLISASLIMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGK------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42779 for 1406 contacts (-30.4/contact) +
2D Compatibility (PS) -20379 + (NN) -7449 + (LL) 11040
1D Compatibility (HY) -17200 + (ID) 3500
Total energy: -80267.0 ( -57.09 by residue)
QMean score : 0.258
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